Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSKNPDNYMFLMHKISLTTNSGSLTLSGTNGPIIWEPCLDKPTDENNRFNLEKNEFSELKIFEITEEVEETYNDMMKLSWVEAISKSVIDFTNNIEAEKVDLREQQYLISAIEAWRALSRELGQSNTIQPYKKTAIKMEDLI---------------
2KI8 Chain:A ((1-146))
MGSSH--------HHHHHSSGRENLYFQGHMLEVEVISGRTLNQGATVEEKLTEEYFNAVNYAEINEEDWNALG-LQEGDRVKVKTEFG---EVVVFAKKGDVPKGMIFIPMGPYANMVIDPSTDGTGMPQFKGVKGTVEKTDEKVLSVKELLEAIGS
General information:
TITO was launched using:
RESULT:
Template:
2KI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19527 for 883 contacts (-22.1/contact) +
2D Compatibility (PS) -13542 + (NN) 1716 + (LL) 704
1D Compatibility (HY) -800 + (ID) 900
Total energy: -32349.0 ( -36.64 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_2KI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KI8-query.scw
PDB file :
Tito_Scwrl_2KI8.pdb
: