Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNR-YKFVFGD-KPLTLTTDKDNLFMEEIERVATEKYEA-IKEKL-PNADNETIA-----ILMAINALSVQL-SREIDIEKMEDELNKLRSKT-IS-DI-KEKVSED
3CQB Chain:A ((2-103))
-------NASKGMALRSVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDSADINAFATGAKDSLVAVSTGLLHNMTRDEAEAVLAHEVSHIANGDMVTMTLMQ------
General information:
TITO was launched using:
RESULT:
Template:
3CQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6695 for 564 contacts (11.9/contact) +
2D Compatibility (PS) -9531 + (NN) -1285 + (LL) 1100
1D Compatibility (HY) -800 + (ID) 550
Total energy: -4371.0 ( -7.75 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_3CQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CQB-query.scw
PDB file :
Tito_Scwrl_3CQB.pdb
: