Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALINENS-QASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
3S5P Chain:A ((22-160))
MKVAFASDHGGRDLRMFL-QQRAS----AHGYEVMDLGT-----------PDFAKIGCEAVTSGRADCCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRT-TG---PEVAASILSRFLSTNFEGG-RHAARIAK-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90801 for 1059 contacts (-85.7/contact) +
2D Compatibility (PS) -14463 + (NN) -12094 + (LL) 6284
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -116724.0 ( -110.22 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3S5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S5P-query.scw
PDB file :
Tito_Scwrl_3S5P.pdb
: