Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIKELITKQKTWEII-------------LLVVSGILIPVILAIIK--------------MKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQ----LTVENKGNMKQAITEIIISQIKKV---ETHIPDIQLD-----GGFYEKFQKYLLIGYNNGNIESKVETIRLQVCSVEQNTFC-ENLIDEIFSDDKIIDS------------GSVESIFL------IDLKKYYSIFDN-----NKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKP--HPRGLAGPGVEKLPLIDITKDVTKATAKTHQILEQGANQVGFNILVD------------------------------RTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK------------------------------------------ |
| 2H5E Chain:A ((3-529)) | LSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE--DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDK--FTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69114 for 2372 contacts (-29.1/contact) +
2D Compatibility (PS) -36894 + (NN) 5894 + (LL) 320
1D Compatibility (HY) -8800 + (ID) 2100
Total energy: -110694.0 ( -46.67 by residue)
QMean score : 0.273
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