Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRFFHFLVWSLTSSATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARR-LFLKKHELTGREYAYIKKNL---EEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVELTEKYAFLSSHPKKSKELSMSLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK |
4DVK Chain:A ((1-157)) | ----ENITQWNLQDNGTE---------GIQRAMFQR-------GVNRSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEKTNYTCCRLQRHEWNKHGWCNWYNIEPWILLMNKTQANLTEGQPLRECAVTCRYDRDSDLNVVTQARDSPTPLTGCKKGKNFSFAGILVQGPCNF------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41913 for 1167 contacts (-35.9/contact) +
2D Compatibility (PS) -15451 + (NN) 1746 + (LL) 4704
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -52764.0 ( -45.21 by residue)
QMean score : 0.083
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