Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
4HLC Chain:B ((4-204))
----FITFEGPEGSGKTTVINEVYHRLVKD-YDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN-S------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK---
General information:
TITO was launched using:
RESULT:
Template:
4HLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103487 for 1551 contacts (-66.7/contact) +
2D Compatibility (PS) -21949 + (NN) -13755 + (LL) 1184
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -163307.0 ( -105.29 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_4HLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLC-query.scw
PDB file :
Tito_Scwrl_4HLC.pdb
: