Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQK-TRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
1GKU Chain:B ((611-675))------------------------------------SRIEALRKLAHDAEFVIVGTDPDTEGEKIAWDLKNLLSGC----GAV--KR------AEFHEVTRRAILEALESLRD--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17266 for 370 contacts (-46.7/contact) +
2D Compatibility (PS) -7063 + (NN) -2163 + (LL) 8396
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -20946.0 ( -56.61 by residue)
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_1GKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GKU-query.scw
PDB file : Tito_Scwrl_1GKU.pdb: