Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------MQFQIGDMVA----RKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCL----NVYKKIGVPVYGIHCHEKKMSAS-----IEVLLDKYRP-------DILVITGHDAYSKQKGGIDDLNAY----RHSKHFVET---VQTARKK--IPHLDQLVIFAGAC--QSHFE-SLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFME-------------------------RINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN---- |
4OJV Chain:A ((1-369)) | MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVP---SFYEHDREPIEFFIDSKLN--IQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYIT--HPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGH-LSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELR-FLAEERNLGD------LRISIALEGHTLFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58359 for 1814 contacts (-32.2/contact) +
2D Compatibility (PS) -28362 + (NN) -4291 + (LL) 548
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -105064.0 ( -57.92 by residue)
QMean score : 0.114
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