Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------MQFQIGDMVA----RKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCL----NVYKKIGVPVYGIHCHEKKMSAS-----IEVLLDKYRP-------DILVITGHDAYSKQKGGIDDLNAY----RHSKHFVET---VQTARKK--IPHLDQLVIFAGAC--QSHFE-SLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFME-------------------------RINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN----
4OJV Chain:A ((1-369))MVVFEITILGANGGPTEYGTQCFILKPARTEDPELIAVDGGAGMYQLREMLVQGDDELVP---SFYEHDREPIEFFIDSKLN--IQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYIT--HPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNPKEVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRKSKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKPEQLYGH-LSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELR-FLAEERNLGD------LRISIALEGHTLFL


General information:
TITO was launched using:
RESULT:

Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58359 for 1814 contacts (-32.2/contact) +
2D Compatibility (PS) -28362 + (NN) -4291 + (LL) 548
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -105064.0 ( -57.92 by residue)
QMean score : 0.114

(partial model without unconserved sides chains):
PDB file : Tito_4OJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OJV-query.scw
PDB file : Tito_Scwrl_4OJV.pdb: