Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHSVLICDRDVYIAVSGSSKKDYLNKSISEMLERTMDQRSSVLESDAKSVQLVNGIDEDMNSYTVGPIVANGDPIGAVVIFSKD-QTMGEVEHKAVETAAGFLARQMEQ
3KSH Chain:A ((110-159))
-------------------------------------------------------------------------------------------------------------------------------ANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQL--
General information:
TITO was launched using:
RESULT:
Template:
3KSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15297 for 241 contacts (-63.5/contact) +
2D Compatibility (PS) -5631 + (NN) -5326 + (LL) 8832
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -20272.0 ( -84.12 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3KSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSH-query.scw
PDB file :
Tito_Scwrl_3KSH.pdb
: