Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3KUE Chain:A ((2-135))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIALQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KUE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106171 for 1003 contacts (-105.9/contact) +
2D Compatibility (PS) -13713 + (NN) -1231 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -131777.0 ( -131.38 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3KUE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KUE-query.scw
PDB file :
Tito_Scwrl_3KUE.pdb
: