Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MRIMKFFKDVG----KEMKKV-SWPKGKELTRYTITVI---STVIFFVIFFALLDTGISQLIRLIVE---
1CY5 Chain:A ((1-92))
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGFLTISEEEKVRNEPTQQQRAAMLIKMILKKDNDSYVSFYNALLHEGYKDLAALLHDGIP
General information:
TITO was launched using:
RESULT:
Template:
1CY5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52882 for 345 contacts (-153.3/contact) +
2D Compatibility (PS) -6236 + (NN) -3331 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -65599.0 ( -190.14 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_1CY5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CY5-query.scw
PDB file :
Tito_Scwrl_1CY5.pdb
: