Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAAEEQSEFDLILAGAG-SQKIKVIKVVREITGLGLKEAKELVDNTP---KPLKEGIAKEEAEELKAKLEEV------GASVEVK
3O1F Chain:A ((27-103))
-------------------------------------------------------MYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVA-VNKYARENEHPLLCTL-
General information:
TITO was launched using:
RESULT:
Template:
3O1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15935 for 433 contacts (-36.8/contact) +
2D Compatibility (PS) -7048 + (NN) -1582 + (LL) 5152
1D Compatibility (HY) -6800 + (ID) 600
Total energy: -26813.0 ( -61.92 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3O1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1F-query.scw
PDB file :
Tito_Scwrl_3O1F.pdb
: