Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIA-AGFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSA------TDPTFALGWRRNGSKSM-----------------EWMF----GPHASENAYGHTGW---TGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
| 2FFY Chain:A ((4-344)) | ----------------------------------------------QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYY-FTWGYADI-------AKKQPVTQQTLFELGSVSKTFT-GVLGGDAIARGEIKLSDPTTKYWPELTAK------QWNGITLLHLATYTAGGLPLQVPDE--------VKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAE--EKNYAW----GYREGK--------------AVHV----SPGALDAEAYGVKSTIEDMARWVQSNLKPL------DINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDAKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNP-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108436 for 2646 contacts (-41.0/contact) +
2D Compatibility (PS) -33467 + (NN) -17301 + (LL) 8488
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -162166.0 ( -61.29 by residue)
QMean score : 0.431
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