Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSNGDKLSLSVQNLA-NTNEITIVQAIGELKKSGK--DAIPVLV-EALKEE-GSLCNIAAAVLGEFGE--DASEAAEELSCLLKSHAEDTRMAAAISLMRIGK---------PSLPFVIKIAQESEGQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGKLIAFQLKDKED
3L9T Chain:A ((75-232))
----------LAFLAYQSDVYQVRMYAVFLFGYLSKDKEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKKALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKF-PDLVKIELKNWKLE-SKEINQVYK-----------------
General information:
TITO was launched using:
RESULT:
Template:
3L9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98946 for 1081 contacts (-91.5/contact) +
2D Compatibility (PS) -14672 + (NN) -5178 + (LL) 1676
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -118520.0 ( -109.64 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3L9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9T-query.scw
PDB file :
Tito_Scwrl_3L9T.pdb
: