Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNIFKPAPHIERLDDSKMDAAYKRLRLQVFIGIFIGYAGYYLLRKNFAFAIPYLQEQGF----SKTELGLVLAAVSIAYGFSKFIMGMVSDRCNPRYFLATGLFLSAIVNILFV----------SMPWVTSSVTIMFIFMFINGWFQGMGWPPCGRTMAHWFSI---SERGTKMSIWNVAHNIGGGILAPLVTLGIA--------MFVTWKSVFFFPAIIAIIISFLIVL-------LVRDTPQSCGLPPIEEYR-NDYPKHAFKNQEKELTTKEI--LFQYVLNNKFLWYIAFANVFVYFVRYGVVDWAPTYLTEAKGFSPEDSRWSYFLYEYAGIPGTILCGWISDRFFKSRRAPAGVLFMAGVFIAVLVYWLNPAGNPLVDNIALISIGFLIY--GPVMLIGLQAIDLAPKKAAGTAAGLTGFFGYIGGSAFANAIM---GFVVDRFNWNGGFIMLISSCILAIVFLALTWNT--GKRAEHV-----
4GC0 Chain:A ((5-479))----------------YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE


General information:
TITO was launched using:
RESULT:

Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2230 -325496 -145.96 -760.50
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -145.96
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_4GC0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GC0-query.scw
PDB file : Tito_Scwrl_4GC0.pdb: