Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MVNKQLKKKAQEIGNVPTHYELEIEDYDQKQKKYGQ------------AYFI-WKDPKD-PEKHITVELRNDGALLTFSTTVHSETDKKL-------------------PDAEL--------KLTALQFAAANHPGTFMNFHFQGKEERGQHI-----------------------------RFVYTKMELGLPIPNSGFLID------MTRSGQIVHFLY-------YGEGHKAEVPTEFVAKEKVVSH-------------------------------YLNTMSFEL------------------------MYDVIDGEQEPRLVYEPILPGYSY-----PAD-VDEIVPDQHIADERIEN---------TAPLPPLQNKEEVDIFALLGFTSDMQKVSERDFGEQIGSTWRRGAAPERKDLSIGSYFETRNKN-TIKMK------TDKRTGKLKAALSFMDWRNNLQCSTEECQEIALQFLYALYPR--------AAEFFRVNPVRIDERGRVR----------NHFS-------------VWYKGVPLRFGAARIIVNPETGLIDA------------FMAPDIEPEQLEAINHR--PDVSAEEAKE------AFLAAFDVKLEWQPDFTAGSDQHCKLVYK-PVY-PSYIDAHIRKKKRL--------------
4TXG Chain:A ((107-793))PPLVQVPPPTGNALCRPEALAQTQGVDVP-YCAVYKQGGAEQLANGSRRRIIGYFTSWRTGKDGSPAYLASDIPWSKLTHINYAFAHVDGSNKLSVNETAPGNPATDMSWPGVAGAEMDASLPYKGHFNLLTQYKRKYPGVKTLISVGGWAETGGYFDANGKRVASGGFYSMTVNADGTVNQAGINAFSDSAVAFLRKYGFDGVDIDFEYPTSMNNAGNPLDWTFSNARLGSLNKGYVALLQTLRDRLDRAAAQDGRYYQITAAVPASGYLLRGMETFQGLKYLDFVNVMSYDLHGAWNRFVGPNAALYDDGKDAELAFWNVYSTPQYGNIGYLNTDWAYHYYRGGLPASRVNMGVPYYTRGWKNVSGGSNGLWGSSVGSNCPAGLTECGD--GAVGIDNIWHDLDDSGKEIPGGSNPMWHAKNLEKGLA-GSYLAAYGIDPTLPINQLTGSYQRNYNGALAAPWLWNAGKK-VFLSTEDEQSIAQKAAWIDANNVGGVMFWELAGDYDWKAQRNNGQGEYFIGTTLTSLLYNTFSQPPKVSAPTAAIDVGFSLGGFKLGDQNYPINPKLTIVNRSQTTLPGGTEFQFDVPTSAPANIADQSGFGLKVVSAGHSGSNVGGLKGDFNRVSVKLPSWQSLGAGQSVTLDVVYYLPISGPSHYTVGLNGKTYAIRDEAPYLPYLRVL


General information:
TITO was launched using:
RESULT:

Template: 4TXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1885 -40478 -21.47 -90.35
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -21.47
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.082

(partial model without unconserved sides chains):
PDB file : Tito_4TXG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TXG-query.scw
PDB file : Tito_Scwrl_4TXG.pdb: