Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLPAKTFVILCILFLLDLCFSYIRHEWHS-QNALQDM---PVPSDLHPIVKQNADALKAAAANKGIDVVITEGFRSFKEQDELYKQGRTKKGN---IVTYARGGESYHNYGLAIDFALQKKDGSIIWDMEYDGNQNGKSDWLEVVEIAKTLGF--EWGGDWKRF----KDYPHLEMIPN
4MUR Chain:A ((22-182))----------MNTLQLINKNHPLKK---NQEPPHLVLAPFSDHDVYLQPEVAKQWERLVRATG-LEKDIRLVSGYRTEKEQRRLWEYSLKENGLAYTKQFVALPGCSEHQIGLAIDVGLKKQEDD-DLICP-HFRDSAAADL--FMQQMMNYGFILRYPEDKQEITGISYEPWHFRYVG-


General information:
TITO was launched using:
RESULT:

Template: 4MUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 656 -41836 -63.77 -282.67
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -63.77
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_4MUR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MUR-query.scw
PDB file : Tito_Scwrl_4MUR.pdb: