Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------MHVITTQV-----LF-IFCFLLLIHSIETLAYATRLSGARVGFI-ASALSLFNVMVIVSRMSNMVQQPFTGHLID--------DAGKNALAIV------------GEQFRFLIFGSTV-GTILGIILL---PSFVA-LFSRAIIHLAGGGGSVFQVFRKG--------FSKQGFKNALSYL------RLPSISY-VKGFHMRLIP----KRLFVINM-LITSIYTIGVLS-ALYAGLLAPERSTTAVMASGLINGIATMLLAIFVDPKVSV-LADDVAKGKRSYIYLKWTSVTMVTSRVAGTLL-------AQLMFIPGAYY-I-AWLTKWF----------------------------------
4MTN Chain:A ((5-406))GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGREIDRDELGDILGRIS-AQTKQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEGSAITVNIGKAEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGERIEVVRWNDSLQVLVPNAMQPSEVEDVILCPMLGRVLVLVRDDQLSLAIGK---RGQNVRLASKLVGWDIDVMTREELDQQLDQAVV-AYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE


General information:
TITO was launched using:
RESULT:

Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 879 -159218 -181.13 -603.10
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -181.13
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.131

(partial model without unconserved sides chains):
PDB file : Tito_4MTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MTN-query.scw
PDB file : Tito_Scwrl_4MTN.pdb: