Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIERYSRPEMSAIWTDENRFQAWLEVEILACEAWAELGVIPKEDVKVMREN-A--SFDINRILEIEKDTRHDVVAFTRAVSESLG----EERKWVHYGLTSTDVVDTALSYLLKQANDILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLERFKQAKAGIEVGKISGAVGTYANI---DPFVEQYVCEKLGLKAAPISTQTLQRDRHADYMATLALIATSIEKFAVEIRGLQKSETREVEEFFAKGQKGSSAMPHKRNPIGSENMTGMARVIRGYMMTAYENVPLWHERDISHSSAERIILPDATIALNYMLNRFSNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVEAEEKITSRLSPEKIADCFDYNYHLK----NVDLIFERLGLA
1RE5 Chain:A ((6-445))FDAYFTAPAMREIFSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGNSAIPLVKALGKVIATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLPE-QPWHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAP----------KRNPVGAAVLIGAATRVPGLLSTLFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLA-QRLGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYLGQARVWVARAVSEH---


General information:
TITO was launched using:
RESULT:

Template: 1RE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2016 -210482 -104.41 -505.97
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -104.41
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_1RE5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RE5-query.scw
PDB file : Tito_Scwrl_1RE5.pdb: