Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MKVFLIGANGQIGQRLVSLFQDNPDH-SIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKT-----------------LLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALK--PYYVAKHYADKILEASGLTYTIIRPGGLRNEPG------TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL-----------
1XQ6 Chain:A ((1-253))SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDIT-DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF


General information:
TITO was launched using:
RESULT:

Template: 1XQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1126 -89397 -79.39 -421.68
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -79.39
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_1XQ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XQ6-query.scw
PDB file : Tito_Scwrl_1XQ6.pdb: