Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKTSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPTLFRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEASIEDVDDAFLKNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYAPTLGVLGAVIGLIAALSHMDNTDELGHAISAAFVATLLGIFTGYVLWHPFAN-KLKRKSKQEVKLREVMIEGVLSVLEG--QAPKVIEQKLLMYLPAKDRLKFAEQGEAQNGEKKEEEA------------
1XNG Chain:B ((3-264))KDYQKLIVYLCDFLEKEVQK----------RGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSM------PENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKS---DSLVIGTSNKSERMLGYGTLFGDLACAINPIGEL----FKTEVYELARRLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPLLKDIEALFQTKPIDTETLAQLGYDEILVKNITSRIQKNAFKLELPAIAKRFNPELEHH


General information:
TITO was launched using:
RESULT:

Template: 1XNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1189 -124709 -104.89 -504.89
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -104.89
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_1XNG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XNG-query.scw
PDB file : Tito_Scwrl_1XNG.pdb: