Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISLQSDQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRSLNK
3GBY Chain:A ((4-127))----------SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWP------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER------


General information:
TITO was launched using:
RESULT:

Template: 3GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 529 -90576 -171.22 -742.43
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -171.22
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_3GBY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GBY-query.scw
PDB file : Tito_Scwrl_3GBY.pdb: