Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWRNASMNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQYIIEADLTFLQPTQVTVTLS-GCEFILTVKSS------------GQTFEKQMMLPFYFNDK-NIQVECENQILTVAVNKETEDGSSFSLQFPLS
4YL9 Chain:A ((25-119))--------------------------------------IPPIDMYEEGGELVVVADLAGFNKDKISVRLSAQNELIINAEREIQYIGTKYATQRPLKIHKVIRLPVKVKRDSQVTAKYENGVLTIRIPVEGSV-----------


General information:
TITO was launched using:
RESULT:

Template: 4YL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 241 -10237 -42.48 -126.38
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -42.48
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_4YL9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YL9-query.scw
PDB file : Tito_Scwrl_4YL9.pdb: