Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKT-------LLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVE-KGQYYKFLQQT
3TIO Chain:D ((3-175))VLHPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYL------


General information:
TITO was launched using:
RESULT:

Template: 3TIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 990 -61092 -61.71 -370.25
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -61.71
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3TIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TIO-query.scw
PDB file : Tito_Scwrl_3TIO.pdb: