Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHSKTLLLTAAAGLMLTCGAVSSQAKHKLSDPYHFTVNAAAETEPVDTAGDAADDPAIWLDPKTPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIR--YDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGENIDHGQKANQNFKIVPWERIADQIGFRPLANEQVDPRKLTDRSGK
1Q7F Chain:A ((759-1037))-IKRQRMIYHCKFG-------EFGVMEGQFTEPSGVAVN--------------------------AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT--HQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC---KVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVV---------------NDKQEIFISDNRAHCVKVFN------YEGQYLRQIGGEGITNYPIGVGI---NSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDG--------------SVVLASK----------DYRLYIYRYVQLAP--------------------VGM


General information:
TITO was launched using:
RESULT:

Template: 1Q7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1709 41823 24.47 151.53
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 24.47
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_1Q7F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q7F-query.scw
PDB file : Tito_Scwrl_1Q7F.pdb: