Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDYRRDGQNDQHQTEPSHTEQQNTENQKLIGHSEQELLDAPVSYEAGRQETASALEMEKQETAVKKEKKRRAAWLSPILGGIIGGGLMLGIAPYLPSDQNQATETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVGISNIQTSQNNTFGTGGGSSSESESGTGSGVIFKKDSDKAYIITNNHVVEGANKLTVTLYNGETETAKLVGSDTITDLAVLEISGKNVKKVASFGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRT-IDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGINSLKVSESGVE-SLGFAIPSNDVEPIVDQLLQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIKSEDVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGKTKTLNATLTKQTESSSS
3STJ Chain:C ((63-334))---------------------------------------------------------------------------------------------------------------------------------------------------------------------GLGSGVII--NASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFG--LGQTATSGIVSALGRSGLNLEGLE-----NFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMS-------ADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATT-EPGTKVKLGLLRNGKPLEVEVTLDTS------


General information:
TITO was launched using:
RESULT:

Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1600 24964 15.60 92.46
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.73

3D Compatibility (PKB) : 15.60
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_3STJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3STJ-query.scw
PDB file : Tito_Scwrl_3STJ.pdb: