Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYRE-E-IELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV----DNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFD-NKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK
3PL5 Chain:A ((36-317))-TFKILTDSTADLPESWTQENDVQVLGLTVQLDGITYETVGPDRLTSRVLLEKIAA-GSKPTTSQVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEIVDTLAATGGEGYLAMLAAQAREEGKS-LKETKELILDVGPRLRTFFLVDNLYHLMRGGRLS--------LVNIKPLLWLDASGKLVPIAKLRGRKKGMKEMLKRATADV-A--HDTAVVAYANDSEAAENLKEQLLANEKIKNVVTLPLGPVISTHVGPNTLAVFTIGK


General information:
TITO was launched using:
RESULT:

Template: 3PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1479 29492 19.94 110.46
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 19.94
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3PL5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PL5-query.scw
PDB file : Tito_Scwrl_3PL5.pdb: