Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL-AEGDNSIVVVKGANDDITPAYALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPA---RPLKQETIDHATYLTPNEHEASILFPELTISEALALYPAKLFITEGKQGVRYSAGSKEVLIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEA----ALRFANRAASLSVCSFGAQGGMPTRNEVEELLS
3GO6 Chain:B ((22-287))---VCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVAPGANAHLTPVPS-----AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEAND-WPS---------PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSG----------------


General information:
TITO was launched using:
RESULT:

Template: 3GO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1539 -62115 -40.36 -240.75
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -40.36
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_3GO6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GO6-query.scw
PDB file : Tito_Scwrl_3GO6.pdb: