Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIH------PDSINTCAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLET-----EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVT-------PEIEVGAYTDI-IIDGEVYGRALRTR-RDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV
4NSP Chain:A ((13-252))------------TLSLWKREQARLKAHVVDRDTEAWQRDPAFSGLQRVGGVDVSFV--DS-VRACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCC--RFRIPEPVRQADICSREHIRKSAA---


General information:
TITO was launched using:
RESULT:

Template: 4NSP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1182 -36159 -30.59 -165.87
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -30.59
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_4NSP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NSP-query.scw
PDB file : Tito_Scwrl_4NSP.pdb: