Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLHKERRIGRLSVLLLLNEAEESTQVEELERDGWKVCLGKVGSMDAHKVVAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI
1WMQ Chain:B ((1-147))-TLHKERRIGRLSVLLLLNE----TQVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI


General information:
TITO was launched using:
RESULT:

Template: 1WMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 689 -96900 -140.64 -677.62
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.99

3D Compatibility (PKB) : -140.64
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.650

(partial model without unconserved sides chains):
PDB file : Tito_1WMQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WMQ-query.scw
PDB file : Tito_Scwrl_1WMQ.pdb: