Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTDANPAFDTVHPSGHILVRSCRGGYMHSVSLSEAAMET-DAETLAEAILLTADVSCLKALLEVRNEIVAAGHTPSAQVPTTDDLNVAIEKLLAHQLRRRNR
2OCC Chain:H ((7-85))
KIKNYQTAPFDSRFPNQN-QTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13267 for 463 contacts (-28.7/contact) +
2D Compatibility (PS) -8168 + (NN) -5065 + (LL) 2168
1D Compatibility (HY) 1200 + (ID) 600
Total energy: -23732.0 ( -51.26 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2OCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCC-query.scw
PDB file :
Tito_Scwrl_2OCC.pdb
: