Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEHQSLPAPEASTEVRVAIV-GVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVD-AKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIAS-DPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
| 4YWJ Chain:A ((9-145)) | --------------MRRIAVVGAAGRMGKNLIEAVQQ--T-------------------GGAAGLTAAVDRPDSTLVGADAGELAGLGR-----------IGVPL-----------------------SGDLGKVCE--EFDVLIDFTH---PSVTLKNIEQCRKARRAMVIGTTGFSADEKLLLAEAA-KDIPIVFAANF--SVGVNLCLKLL------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110476 for 1005 contacts (-109.9/contact) +
2D Compatibility (PS) -13817 + (NN) 2299 + (LL) 13344
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -112350.0 ( -111.79 by residue)
QMean score : 0.382
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