Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITELTLACGPDNRLAEKGWTTHNNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDKPD |
| 1U5T Chain:A ((20-232)) | VNKTILEKQSVELRDQLMVFQERLVEFAKKHNSELQAS--------------------------------PEFRSKFMHMCSSIGIDPLSLFDRDKHLFTVNDFYYEVCLKVIEICRQTKD----------------MNGGV-------ISFQELEKVHFRK-----LNVGLDDLEKSIDMLKSLECFE-------------IFQIRGKKFLRSVPN-----------------ELTSDQTKILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANG-------LLWIDYQGGAEALYWDPSWITRQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13973 for 1548 contacts (9.0/contact) +
2D Compatibility (PS) -22390 + (NN) -10822 + (LL) 3368
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -23671.0 ( -15.29 by residue)
QMean score : 0.240
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