Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGN-YRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAM-PPPIFVAASGPQSATLAGRYGDGWIAQARDI-NDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLW---RFTAG-A---VD----QPNP-VEIQRAA--------ESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFP--QDDPITAIDFYRTNVLPELR |
| 1F07 Chain:A ((1-321)) | -----------------------------------------MKFGIEFVPNE-PIEKIVKLVKLAEDVGFEYAWITDHYN--------NKNVYETLALIAEGTETIKLGPGVTNPYV-RSPAITASAIATLDELSNGRATLGIGPGD-KATFD---ALGIEWVKPVSTIRDAIAMMRTLLAGEKTES-GAQL------MGVKAVQEKIPIYMGAQGPMMLKTAGEISDGALINASNPKDFEAAVPLIKEGAEAAGKSIADIDVAAYTCCSIDEDAAAAANAAKIVVAFIAAGSPPPVFERHGLPADTGKKFGELLGKGDFGGAIGAVDDALMEAFSVVGTPDEFIPKIEALGEMGVTQYVAGSPIGPDKEKSIKLLGEVIASF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152464 for 2541 contacts (-60.0/contact) +
2D Compatibility (PS) -32657 + (NN) -23759 + (LL) 1264
1D Compatibility (HY) -10000 + (ID) 3600
Total energy: -221216.0 ( -87.06 by residue)
QMean score : 0.524
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