Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAV-RGPKLFQGLAFVV-SRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQPN--LSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSM--KNYETIIEEETLRETANWPQ--GQAFATLPSMMHITLNAILRAIFGAGGSELD-ELRRLIPPWVTLGS---RL-AALPKPKRDYGRLSP--WGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYD----DGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNG-------------GHELRQAAILEVQRARTVIDFAA-RRVNPPVYQLGEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKP---SPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 1PO5 Chain:A ((9-445)) | -------------GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGS-RPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK-DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165816 for 2981 contacts (-55.6/contact) +
2D Compatibility (PS) -43927 + (NN) -26191 + (LL) 1840
1D Compatibility (HY) -23600 + (ID) 4500
Total energy: -262194.0 ( -87.96 by residue)
QMean score : 0.499
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