Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVDA-GVRQVVILAAGLDARAYRLNW-PAGTVVYEIDQPSVLEYKAGILQSHGAVPTA------------------RRHAVAVDLR-DDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTMNTKGNTQRWNRMRERLGLD-IDVQALTYHEPDRSDAAQWLATHGWQVHSVSNREE----MARLGRAIPQDLVDETVRTTLL-RGRLVTPAQPA |
| 1RJD Chain:A ((2-329)) | ----------------ERIIQQTDYDALSCKLAAISVGYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGKVDKAMRSSFPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNVIVNDMWEIFNAQIPESERKRLRSLQFLDELEELKVMQTHYILMKAQWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71590 for 2461 contacts (-29.1/contact) +
2D Compatibility (PS) -32295 + (NN) -4855 + (LL) 756
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -116034.0 ( -47.15 by residue)
QMean score : 0.327
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