Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSG-------------PSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGE-------------YQL----KLTPPFVPGMETAGVVRSAPSD-AGFHVGERVSAFGV---------------------------LGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALAR--RAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE------------------GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP |
| 3KRT Chain:A ((31-420)) | YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN-PICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY-----RE---AWEANR-LIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248086 for 2770 contacts (-89.6/contact) +
2D Compatibility (PS) -32710 + (NN) -6793 + (LL) 800
1D Compatibility (HY) -9200 + (ID) 3600
Total energy: -299589.0 ( -108.15 by residue)
QMean score : 0.461
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