Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMSSYPRQRPRRLRSTVAMRRLVAQTSLEPRHLVLPMFVADGIDEPRPITSMPGVVQHTRDSLRRAAAAAVAAGVGGLMLFGVPRDQDKDGVGSAGIDPDGILNVALRDLAKDLGEATVLMADTCLDEFTDHGHCGVLDDR-GRVDNDATVARYVELAVAQAESGAHVVGPSGMMDGQVAAIRDGLDAAGYIDVVILAYAAKFASAFYGPFREAVSSSLSG--DRRTYQQEPGNAAEALREIELDLDEGADIVMVKPAMGYLDVVAAAADVSPVPVAAYQVSGEYAMIRAAAANNWIDERAAVLESLTGIRRAGADIVLTYWAVDAAGWLT |
3OBK Chain:C ((22-341)) | ---------RPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDE-ETSVPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMAL-KEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190394 for 2728 contacts (-69.8/contact) +
2D Compatibility (PS) -35767 + (NN) -20260 + (LL) 904
1D Compatibility (HY) -23600 + (ID) 7200
Total energy: -276317.0 ( -101.29 by residue)
QMean score : 0.572
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