Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
4XRF Chain:A ((16-101))
----------------KKMQTELLEQMQATGLTPPQFYILKILDHY-GA-SRATTLAKKMYVKPSAITVMIDRLIDQELVERYHDKDDRRVVIIELTKKGKARV-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4XRF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40377 for 567 contacts (-71.2/contact) +
2D Compatibility (PS) -9080 + (NN) -2366 + (LL) 4948
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -50825.0 ( -89.64 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_4XRF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XRF-query.scw
PDB file :
Tito_Scwrl_4XRF.pdb
: