Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFDSKVAIVTGAAQGIGQAYAQALAREGASVVVADINADGAAAVAKQIVADGGTAIHVPVDVSDEDSAKAMVDRAVGAFGGIDYLVNNAAIYGGMKLDLLLTVPLDYYKKFMSVNHDGVLVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNF----YGLAKVGVNGLTQQLARELGGMKIRINAIAPGPIDTEATRTV---TPAELVKNMVQTIPLSRMGTPEDLVGMCLFLLSDSASWITGQIFNVDGGQIIRS |
4WEC Chain:B ((31-269)) | ----KVAVITGGASGIGLATGRRLRAEGATVVVGDIDPTTGKAAADEL-----EGLFVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAGI-SPPEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH-IPLGRFAEPEELAAAVAFLASDDASFITGSTFLVDGG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141615 for 1982 contacts (-71.5/contact) +
2D Compatibility (PS) -24827 + (NN) -7955 + (LL) 896
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -191901.0 ( -96.82 by residue)
QMean score : 0.513
|
|
|