Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRHWPLFDLRITTPRLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVARE--GAMAEALLFRLTRDDWQRHRTVEVRVDGFDRCRPLFGPLEPPRY
3FBU Chain:A ((2-167))
----------FIKAERLLIRKFEFKDWEAVHEYTS----DSDVMKYIPE-GVF-TEEDTRNFVNKNMG--------AKNFPVILIGENILVGHIVFHKYF--GEHTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKCIPHGNEWWDEYYYAILEE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56939 for 1210 contacts (-47.1/contact) +
2D Compatibility (PS) -16484 + (NN) -1805 + (LL) 2912
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -78416.0 ( -64.81 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: