Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQD--PVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
2EG4 Chain:A ((4-229)) | ------------------PEDAVLVDTRP-RPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGL--RSPVVLYDEGLTSRLCRTAFFLGLGGL-EVQLWTEGWEPYATEKEEPKPE-----RTEVVA-KLRRDWLLTADEA---ARHPLLLDVRSPEEFQGKVHPPC------CPRGGRIPGSKNAPLELFLSPE-------G---LLERLGLQPGQEVGVYCHSGARSAVAFFVLRS-LGVR-ARNYLGSMHEWLQ-EGLPTE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93798 for 1820 contacts (-51.5/contact) +
2D Compatibility (PS) -24248 + (NN) -13752 + (LL) 3192
1D Compatibility (HY) -7200 + (ID) 3200
Total energy: -139006.0 ( -76.38 by residue)
QMean score : 0.466
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