Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADTEHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGDGHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAHLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
2JAP Chain:D ((5-220)) | ---LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHIT------HTATKEMYEQRISQIRKLQAQDI------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78656 for 1844 contacts (-42.7/contact) +
2D Compatibility (PS) -23080 + (NN) -5483 + (LL) 3796
1D Compatibility (HY) -13600 + (ID) 3800
Total energy: -120823.0 ( -65.52 by residue)
QMean score : 0.494
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