Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLR--DAGPVV---FMNGWYYLTRREDVLAALRNPKVFSSRKALQP--PGNPLPVVPLAFDPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGECEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMS-DRPHPTEADVAAARE-LLEYLTAMVAERRRNPGPDVLSQ---VQIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAPRVTTEPVTVGGMTLPAGSPVRLCMAAV---NRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALKNLPLRWS |
3LXI Chain:B ((43-415)) | ------------------------------AWKRVQQPDTPPLVWTPFTGGHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQRGVEELFRRFAVVSDARYVVSD-MEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVD---LSRRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLK-DRAVPIYHSGIVAAVENIPLEWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224584 for 2936 contacts (-76.5/contact) +
2D Compatibility (PS) -39071 + (NN) -21799 + (LL) 1588
1D Compatibility (HY) -24400 + (ID) 6250
Total energy: -314516.0 ( -107.12 by residue)
QMean score : 0.533
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