Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLTPHEQERLLLSYAAELARRRRARGLRLNHPEAIAVIADHILEGARDGR-TVAELMASGREVLGRDDVMEGVPEMLAEVQVEATFPDGTKLVTVHQPIA
4GY7 Chain:A ((1-101))
MKLSPREVEKLGLHNAGYLAQKRLARGVRLNYTEAVALIASQIMEYARDGEKTVAQLMCLGQHLLGRRQVLPAVPHLLNAVQVEATFPDGTKLVTVHDPIS
General information:
TITO was launched using:
RESULT:
Template:
4GY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48865 for 699 contacts (-69.9/contact) +
2D Compatibility (PS) -11151 + (NN) -6319 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: -80135.0 ( -114.64 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_4GY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GY7-query.scw
PDB file :
Tito_Scwrl_4GY7.pdb
: