Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQVHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVW-YQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGLRP |
4Y2P Chain:A ((258-542)) | --------------------------GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF-------IPAN------PNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL-FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRM------------------------VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLV--PQMSQHMEDWIPHLKRGH-IEDCGHWTQMDKPTEVNQILIKWL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195370 for 2423 contacts (-80.6/contact) +
2D Compatibility (PS) -29376 + (NN) -4007 + (LL) 3420
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -254983.0 ( -105.23 by residue)
QMean score : 0.371
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