Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWFSAVFDGL----GDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHL-SDGFTAAAAAKAPSLAWNRDDG-LQDMLVRKAFR-R-AITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCD--IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRRRPG |
| 2H9B Chain:A ((89-299)) | ---------------------------------------------------------------------------------------------EKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKHSLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNME-ESTYIYSLYETIRQIYAYEGFT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101977 for 1560 contacts (-65.4/contact) +
2D Compatibility (PS) -21554 + (NN) -4047 + (LL) 8316
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -126912.0 ( -81.35 by residue)
QMean score : 0.437
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