Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRG----------LIVPRSGQ---YVFKEIVEH--YLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
2Y9W Chain:C ((9-150)) | ------------------------LDLPGTRILNGA-----NWANNSATSGTLIIFDQSTPGQDADRWLIHNYLDGYKIFNM-----------GSNNWASVSRGNTVLGVSEF--DGQTCKWSI-EYSGNG--EEFWIRVPREGGGGAVWTIKPASSQGPTTVFLDLLKETDPNQRIKFAV------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66637 for 834 contacts (-79.9/contact) +
2D Compatibility (PS) -12479 + (NN) -1896 + (LL) 6772
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -80340.0 ( -96.33 by residue)
QMean score : 0.229
|
|
|