Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGME-----GTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG-
2KX7 Chain:A ((687-797))
------MERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESRS
General information:
TITO was launched using:
RESULT:
Template:
2KX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4092 for 718 contacts (5.7/contact) +
2D Compatibility (PS) -11417 + (NN) -5341 + (LL) 744
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -15372.0 ( -21.41 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2KX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KX7-query.scw
PDB file :
Tito_Scwrl_2KX7.pdb
: