Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSTSTTIRVSTQTRDRLAAQARERG-ISMSALLTELAAQAERQAIFRAEREASHAETTT-Q-AVRDEDREWEGTVGDGLG
1Y9B Chain:A ((3-83))
TTLPRITARVDVDTQDLLAKAAALAGMSSINSFVLNAAIEKAKQVIEREQALKLSQADAVLLMEALDNPAVVNAKLKLASE
General information:
TITO was launched using:
RESULT:
Template:
1Y9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7101 for 312 contacts (22.8/contact) +
2D Compatibility (PS) -8760 + (NN) -5630 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 700
Total energy: -6389.0 ( -20.48 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9B-query.scw
PDB file :
Tito_Scwrl_1Y9B.pdb
: